[Slaam] [External] SLAAM Seminar Monday, Nov 13th, 9am Pacific: Isabella Graf (Yale University)

Mon Nov 6 14:38:24 PST 2023

I'm not Bob. You might want to resend this.

Thanks,

Richard (Dick) Gordon

Theoretical Biologist

DickGordonCan at protonmail.com

Retired from University of Manitoba

Volunteer at Gulf Specimen Marine Lab & Aquarium (http://www.gulfspecimen.org/gulf-specimen-lab-staff/, https://www.facebook.com/GulfSpecimenAquarium/)

DickGordonCan at protonmail.com (ask if you want access to my papers)

home: 1-(204) 767-2164

http://orcid.org/0000-0003-4970-9953

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now on Central Standard Time

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------- Original Message -------
On Monday, November 6th, 2023 at 4:20 PM, SLAAM Distribution List <slaam at lists.ucmerced.edu> wrote:

> Hey Bob,
>
> The speaker for next week’s SLAAM Seminar seems to be an expert in dealing with noisy signals. I guess she might have some idea about your tricky noisy traces? (not 100% sure though) There is an hour-long timeslot just after the talk to meet with her and talk whatever you want.
>
> Just FYI, in case you are interested!
>
> Best,
> Mengqi
>
>> On Nov 6, 2023, at 4:35 PM, SLAAM Distribution List <slaam at lists.ucmerced.edu> wrote:
>>
>> Dear enthusiasts of the SLAAM seminars,
>>
>> We are excited to announce that the next [Soft Living Active and Adaptive Matter (SLAAM)](https://urldefense.proofpoint.com/v2/url?u=https-3A__physics.ucmerced.edu_slaam&d=DwMF-g&c=WO-RGvefibhHBZq3fL85hQ&r=6T170XR90Za4-nl9r1e8-WfEJbvH5g5hJbA9UumqfWQ&m=blUGUqAYGAyOmfcA6wfbX1KdEHN6f7rlZXR4X15CvyI8uL__ETi299NvZD96qFU6&s=MXUKX4H_djd0Ct_0kzRBhKPqez6-ARSHV2ymcIgm0vs&e=) seminar will be given by Dr. Isabella Graf(Yale University) on Monday, November 13, at 9am Pacific/11am Central/12 noon Eastern time (US), with the title:
>>
>> “A bifurcation integrates information from many noisy ion channels and allows for milli-Kelvin thermal sensitivity in the snake pit organ”
>>
>> Please join at the link below to attend:
>>
>> [https://ucmerced.zoom.us/j/92693607475?pwd=TnI5dDhRRnYvejNZK2xNN0s4M0R5UT09](https://urldefense.proofpoint.com/v2/url?u=https-3A__ucmerced.zoom.us_j_92693607475-3Fpwd-3DTnI5dDhRRnYvejNZK2xNN0s4M0R5UT09&d=DwMF-g&c=WO-RGvefibhHBZq3fL85hQ&r=6T170XR90Za4-nl9r1e8-WfEJbvH5g5hJbA9UumqfWQ&m=O8qMRgNKyoPvtsVZg8ZfBNtLCUDyJgxTRW3qBCkxor7FWyzclXdrZHLsUUJnajQo&s=Fc0LF7BKeY-N8RWCA1JZPtXHGcs7LT8bWaOKdgeG1FE&e=)
>>
>> Zoom Meeting ID: 926 9360 7475 | Passcode: 223642
>>
>> As usual, there will be a 15 min informal Q&A at the end of the hour. Graduate students will have an opportunity to interact with the speaker in an informal setting during the "Meet the speaker" timeslot just after the talk. Please join if the time works for you.
>>
>> Please see more info in the flyer[here](https://physics.ucmerced.edu/sites/physics.ucmerced.edu/files/event/SLAAM/isabella_graf_slaam.pdf)and in the text below:
>>
>> Abstract:The thermal imaging organ of pit vipers is a remarkable example for how biological systems integrate information from many noisy sensors into a collective response. Single nerve fibers innervating the organ robustly respond to milli-Kelvin changes in temperature, even though the opening probability of each individual temperature-sensitive ion channel only changes by 0.1%. Here, we propose a mechanism for the integration of this noisy molecular information into an amplified response. Amplification arises due to proximity to a dynamical bifurcation, separating a regime with frequent and regular firing of action potentials (APs), from one with irregular and infrequent firing. Near the transition, AP frequency can have an extremely sharp dependence on temperature, and most of the information in molecular receptors is efficiently transmitted to AP firing even if additional noise corrupts the signal or readout. Our model explains several key features of experimental data. Most significantly, it predicts that the coefficient of variation in the distribution of times between APs decreases for larger AP frequency. It also suggests that the intrinsic channel timescale may be slower than the timescale of the cell’s voltage dynamics, thereby leading to memory in the state of the channels.
>>
>> Speaker bio:Isabella Graf is a Postdoctoral Fellow in the Physics department at Yale University. She is broadly interested in using methods and tools of statistical mechanics, nonlinear dynamics, and information theory to describe and help understand biological phenomena. Her current research in Ben Machta’s group focuses on signal amplification and information integration in biological sensory systems and on the phase behavior of mixtures with many components. Before joining Yale University, she was a PhD student in Physics in Erwin Frey’s group at LMU Munich, Germany, where she worked on collective dynamics and self-organization in the context of the cell cytoskeleton and on non-equilibrium self-assembly of heterogeneous structures.
>>
>> See you there!
>>
>> Best regards,
>>
>> Dan Beller
>>
>> on behalf of the SLAAM organizing team
>> (Alexandra Tayar, Suraj Shankar, Daniel Beller, Kinjal Dasbiswas)
>>
>> To join the SLAAM mailing list, please sign up [here](https://urldefense.proofpoint.com/v2/url?u=https-3A__docs.google.com_forms_d_e_1FAIpQLScTyzEuuE7TfrrapgP4tzN-5FoPSqbBhURUxa9-2Dzc8USnY1IPzA_viewform&d=DwMFAw&c=WO-RGvefibhHBZq3fL85hQ&r=6T170XR90Za4-nl9r1e8-WfEJbvH5g5hJbA9UumqfWQ&m=NK4EGo1VvrDiYSxdvOUJXgCkEAzTrQzNpQi-P59LZiKL_lMA3briJm9KQh9Y3suN&s=3hc1lEhiJwBLtMEr12Z9K5XtZaVlEfOZKYXGtXCjRDg&e=). If you’re a postdoc interested in giving a SLAAM talk, we invite you to register your interest on that webform.
>>
>> Daniel Beller
>> Assistant Professor
>> Department of Physics and Astronomy
>> Johns Hopkins University
>> pages.jh.edu/dbeller3
>> (he/him/his)
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